More than 100 peer-reviewed publications · 4,300+ citations · h-index 31 · i10-index 67.
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Recent publications (2023 – 2026)
Chen Y, Piantek G, Zhang X, Feng Y, Yan C, Rosenbloom T, Samuels J, Yu D, Novak L, Srivastava G. Patient-Reported Continuity of GLP-1 Receptor Agonist Therapy. Obesity Science and Practice, 2026;e-70189. doi:10.1002/osp4.70189
Yu K, Zhou S, Hou Y, Song Y, Zeng M, Tian F, Du J, Xie W, Yin B, Chen Y, Liu F. Multimodal artificial intelligence agents in healthcare: A scoping review. npj Digital Medicine, 2026. doi:10.1038/s41746-026-03060-z
Zhang X, Jeong E, Yan C, Feng Y, Lyu L, Guo X, Chen Y. CellAwareGNN: Single-Cell Enhanced Knowledge Graph Foundation Model for Drug Indication Prediction. ACM SIGKDD Conference on Knowledge Discovery and Data Mining (KDD '26), 2026;12916–12927.
Wang Z, Wang L, Zhang X, Lowery BD, Shaffer LL, Chen Y, Wells QS, Flynn CR, Williams B, Spann M, Srivastava G. Body Composition Changes After Bariatric Surgery or Treatment With GLP-1 Receptor Agonists. JAMA Network Open, 2026.
Yan C, Zhang X, Kannampallil TG, Adler-Milstein J, Chen Y. Reimagining clinical AI: from clickstreams to clinical insights with EHR use metadata. npj Health Systems, 2025.
Feng Y, Yan C, Huo Y, Li B, Zu Z, Smith MC, Patel MB, Chen Y. Association of Delirium with Increased Risk of Mild Cognitive Impairment and Alzheimer's Disease and Related Dementias. American Journal of Respiratory and Critical Care Medicine, 2025.
Brown KE, Yan C, Li Z, Zhang X, Collins BX, Chen Y, Clayton EW, Kantarcioglu M, Vorobeychik Y, Malin BA. Not the models you are looking for: Traditional ML outperforms LLMs in clinical prediction tasks. Journal of the American Medical Informatics Association, 2025.
Chen Y, Feng Y, Samuels JM, Yu DX, Flynn CB, English WJ, Zhang R, Ikramuddin S. Bariatric Surgery is Associated with Delayed Mild Cognitive Impairment and Reduced Incidence of Alzheimer's Disease and Related Dementias. Annals of Surgery Open, 2025.
Jeong E, Shendre A, Su Y, Guo X, Li L, Chen Y. Association of Omeprazole-Related Myopathy With Drug-Drug and Drug-Gene Interactions Involving CYP2C19 and CYP3A4. Pharmacotherapy, 2025.
Jeong E, Mogos MF, Chen Y. Association of Migraine Treatments with Reduced Ischemic Stroke Risk: Evidence from Two Large-Scale Real-World Data Analyses. Headache, 2025.
Feng Y, Ma R, Zhang X, Chen Y. An Ensemble Approach Integrating Retrieval-Augmented Large Language Models and Boosting Algorithms for Enhanced Catatonia Phenotyping. MedInfo, 2025.
Jeong E, Su Y, Li L, Chen Y. Discovering Severe Adverse Reactions from Pharmacokinetic Drug-Drug Interactions through Literature Analysis and Electronic Health Record Verification. Clinical Pharmacology & Therapeutics, 2024. (Top-viewed article)
Chen Y, Lehmann C, Malin B. Digital Information Ecosystems in Modern Care Coordination: Challenges and Opportunities for AI Solutions. Journal of Medical Internet Research, 2024.
Zhang X, Kang K, Yan C, Feng Y, Vandekar S, Yu D, Rosenbloom ST, Samuels J, Srivastava G, Williams B, Albaugh VL, Chen Y. Enhanced Patient Portal Engagement Associated with Improved Weight Loss Outcomes in Post-Bariatric Surgery Patients. Journal of Medical Internet Research, 2024.
Jeong E, Su Y, Li L, Chen Y. Discovering clinical drug-drug interactions with known pharmacokinetics mechanisms using spontaneous reporting systems and electronic health records. Journal of Biomedical Informatics, 2024.
Zhang X, Yan C, Yang Y, Li Z, Feng Y, Malin BA, Chen Y. Optimizing Large Language Models for Discharge Prediction: Best Practices in Leveraging Electronic Health Record Audit Logs. AMIA Annual Symposium, 2024.
Yan C, Zhang X, Yang Y, Kang K, Were MC, Embí P, Patel MB, Malin BA, Kho AN, Chen Y. Differences in health professionals' engagement with electronic health records based on inpatient race and ethnicity. JAMA Network Open, 2023.
Jeong E, Malin B, Nelson SD, Su Y, Li L, Chen Y. Revealing the dynamic landscape of drug-drug interactions through network analysis. Frontiers in Pharmacology, 2023.
Chen Y, Clayton EW, Novak LL, Anders S, Malin B. Human-Centered Design to Address Biases in Artificial Intelligence. Journal of Medical Internet Research, 2023.